../../tmp/servers/virsirnadb/754429874
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1233 | 1 | tctgtgacattggagagtc | 19 | |
| AY688948.1 | West Nile virus strain Sarafend, complete genome | 8114 | ................... | 8132 | 100 |
| AY532665.1 | West Nile virus strain B956 polyprotein gene, complete genome | 8102 | ................... | 8120 | 100 |
| DQ116961.1 | West Nile virus isolate goshawk-Hungary/04, complete genome | 8114 | ................... | 8132 | 100 |
| DQ318019.1 | West Nile virus strain ArD76104, complete genome | 8102 | ................... | 8120 | 100 |
| DQ318020.1 | Wets NIle virus strain ArB3573/82, complete genome | 8114 | ................... | 8132 | 100 |
| EF429197.1 | West Nile virus SPU116/89, complete genome | 8114 | ................... | 8132 | 100 |
| EF429198.1 | West Nile virus SA93/01, complete genome | 8114 | ................... | 8132 | 100 |
| EF429199.1 | West Nile virus SA381/00, complete genome | 8114 | ................... | 8132 | 100 |
| EF429200.1 | West Nile virus H442, complete genome | 8114 | ................... | 8132 | 100 |
| EU068667.1 | West Nile virus isolate SPU116-89 polyprotein gene, complete cds | 8018 | ................... | 8036 | 100 |
| FJ425721.1 | West Nile virus isolate Reb_VLG_07_H polyprotein gene, complete cds | 8081 | ................... | 8099 | 100 |
| HM147823.1 | West Nile virus from Madagascar, complete genome | 8114 | ................... | 8132 | 100 |
| HM147824.1 | West Nile virus from Democratic Republic of the Congo, complete genom | 8114 | ................... | 8132 | 100 |
| HQ537483.1 | West Nile virus isolate Nea Santa-Greece-2010, complete genome | 8114 | ................... | 8132 | 100 |
| M12294.2 | WNFCG West Nile virus RNA, complete genome | 8102 | ................... | 8120 | 100 |
| AY603654.1 | West Nile virus strain EthAn4766, complete genome | 8111 | ..........c........ | 8129 | 94 |
| DQ256376.1 | West Nile virus strain 804994, complete genome | 8111 | .............g..... | 8129 | 94 |
| DQ786572.1 | West Nile virus isolate France 405/04 polyprotein gene, complete cds | 8087 | .t................. | 8105 | 94 |
| DQ786573.1 | West Nile virus isolate France 407/04 polyprotein gene, complete cds | 8087 | .t................. | 8105 | 94 |
| DQ176636.2 | West Nile virus strain Madagascar-AnMg798, complete genome | 8113 | .......t........... | 8131 | 94 |
| HM756649.1 | West Nile virus isolate WNV-1/US/BID-V4354/2006, complete genome | 8111 | ..........c........ | 8129 | 94 |
| HM756654.1 | West Nile virus isolate WNV-1/US/BID-V4598/2003, complete genome | 8111 | .t................. | 8129 | 94 |
| HM488160.1 | West Nile virus isolate WNV-1/US/BID-V4355/2006, complete genome | 8109 | ..........c........ | 8127 | 94 |
| HM147822.1 | West Nile virus from South Africa, complete genome | 8114 | ..........c........ | 8132 | 94 |
| AY765264.1 | West Nile virus strain Rabensburg isolate 97-103, complete genome | 8111 | .t...........g..... | 8129 | 89 |